Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs112464402 | chr11:34803943 | T/TA | 0 | 214 | 15.2 | 17.73 | 3.83 | KM Plot |
KIRP | rs112476368 | chr14:59991452 | A/G | 0.000205 | 213 | 16.43 | 18 | 11.2 | KM Plot |
KIRP | rs112555934 | chr14:59977232 | T/C | 0.000205 | 213 | 16.43 | 18 | 11.2 | KM Plot |
KIRP | rs112578436 | chr2:54571853 | C/CCCGT | 0.000154 | 203 | 11.43 | 18.47 | 13.8 | KM Plot |
KIRP | rs112584072 | chr16:363213 | A/G | 0 | 211 | 14.68 | 24.55 | 4.07 | KM Plot |
KIRP | rs112610137 | chr16:652045 | C/G | 6.6E-5 | 213 | 16.73 | 14.7 | 6.57 | KM Plot |
KIRP | rs112661971 | chr14:59901054 | C/T | 0.000114 | 213 | 16.43 | 16.05 | 6.63 | KM Plot |
KIRP | rs112716995 | chr14:59978004 | T/C | 0.000205 | 213 | 16.43 | 18 | 11.2 | KM Plot |
KIRP | rs112724132 | chr15:24751323 | A/G | 7.05E-7 | 212 | 16.43 | 17.87 | 9.77 | KM Plot |
KIRP | rs112741820 | chr15:24546895 | G/T | 0.00012 | 212 | 17.03 | 14.03 | 10.23 | KM Plot |
KIRP | rs11274910 | chr1:95286675 | GTCCCAAATGTAAA/G | 0.000105 | 204 | 13.17 | 17 | 16.45 | KM Plot |
KIRP | rs112767862 | chr4:88161981 | G/C | 0.000506 | 214 | 17.03 | 11.67 | 14.1 | KM Plot |
KIRP | rs112777288 | chr15:24513361 | C/G | 0.000132 | 207 | 17.52 | 14.1 | 10.63 | KM Plot |
KIRP | rs112878595 | chr5:79926274 | T/C | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs112901482 | chr14:23726086 | G/A | 5.77E-5 | 208 | 15.65 | 18.03 | 16.53 | KM Plot |